Adlercreutzia
| Adlercreutzia | |
|---|---|
| Scientific classification | |
| Domain: | |
| Kingdom: | |
| Phylum: | |
| Class: | |
| Order: | |
| Family: | |
| Genus: | Adlercreutzia |
| Type species | |
| Adlercreutzia equolifaciens Maruo et al. 2008
| |
| Species[3] | |
| |
| Synonyms | |
| |
Adlercreutzia is a genus in the phylum Actinomycetota (Bacteria).[1]
Etymology
[edit]The generic name derives from H. Adlercreutz, a professor at the University of Helsinki in Finland, for his contributions to research on the effects of phytoestrogens on human health.[2]
Taxonomy
[edit]In 2018, Nouioui et al. proposed merging the genera Asaccharobacter, Enterorhabdus and Parvibacter within the genus Adlercreutzia based on observed clustering of these genera within phylogenetic trees.[4] However, subsequent phylogenetic analyses observed that Parvibacter caecicola exhibited much deeper branching compared to other Adlercreutzia species.[5] Additionally, five conserved signature indels (CSIs) present in the proteins excinuclease ABC subunit UvrA, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, phosphoribosylformylglycinamidine synthase, valine-tRNA ligase and cysteine–tRNA ligase were identified to be exclusively shared by all Adlercreutzia species with the exception of P. caecicola.[5] Thus, the emended description of the genus Adlercreutzia is the same as given before, with the exclusion of P. caecicola, which has been transferred back into the genus Parvibacter.
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[3]
| 16S rRNA based LTP_10_2024[6][7][8] | 120 marker proteins based GTDB 09-RS220[9][10][11] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
See also
[edit]References
[edit]- ^ a b Maruo, T.; Sakamoto, M.; Ito, C.; Toda, T.; Benno, Y. (2008). "Adlercreutzia equolifaciens gen. Nov., sp. Nov., an equol-producing bacterium isolated from human faeces, and emended description of the genus Eggerthella". International Journal of Systematic and Evolutionary Microbiology. 58 (5): 1221–1227. doi:10.1099/ijs.0.65404-0. PMID 18450717.
- ^ a b c A.C. Parte; et al. "Adlercreutzia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2025-02-28.
- ^ a b C.L. Schoch; et al. "Adlercreutzia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
- ^ Nouioui, Imen; Carro, Lorena; García-López, Marina; Meier-Kolthoff, Jan P.; Woyke, Tanja; Kyrpides, Nikos C.; Pukall, Rüdiger; Klenk, Hans-Peter; Goodfellow, Michael; Göker, Markus (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Frontiers in Microbiology. 9: 2007. doi:10.3389/fmicb.2018.02007. ISSN 1664-302X. PMC 6113628. PMID 30186281.
- ^ a b Gupta, Radhey S. (2021), Carro, Lorena (ed.), "Eggerthellaceae", Bergey's Manual of Systematics of Archaea and Bacteria, American Cancer Society, pp. 1–11, doi:10.1002/9781118960608.fbm00384, ISBN 978-1-118-96060-8, S2CID 243126790, retrieved 2021-07-05
- ^ "The LTP". Retrieved 10 December 2024.
- ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
- ^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.
